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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790118.1_cds_XP_016499982.1_1313
CDS Infomation

[gene=LOC107818470] [db_xref=GeneID:107818470] [protein=pentatricopeptide repeat-containing protein At1g11900-like] [protein_id=XP_016499982.1] [location=complement(join(87988..89031,91233..91400))] [gbkey=CDS]
Sequence

ATGGTAGCAGCTGCTTTCAATGGCAGAGCAAAGCTGACCACTTTAACTTTCTTATGCCAT
TCTTGTTTCAATCGATTGAACTATAGTGTCGCTGTTGGGTTACACTCCTCTGCTAAAGGA
ATTCGGGCATTCAACACACTACATCGGTGCAGAAATTTCTTTCTTAACAATTGTATTGAA
TCCATCCCAGTTGGAGTCCTCTTCAATTGGCCGTCTTTTATTCCTAGTATCTTTTCCGGC
AGCTTCCAATCGATCTCAACCCAAGCATCCCCTGCTGAATTTGTTGATGAAGTGTTGACG
GAAGTCCTCTCGGTTATGGCTAATTCTCAAAGTTCAGGAGAGGAACTCTGTGCTGCTTAC
ATTGATAAGTTTTGCAATGACAGAAATCTATCAGCAGCCACTAAGCTATTGCAGACGTTG
CATGATAAAAATATCCTCCTTCCCCCTATTGCATACAATCGCTTTTTTAAAGCTGCAGGC
GAGGAAAATGATATTGGCCTTCTATGTCAGAGTTTCAAGGATCTGTTAGTATCTTGCAAA
TCTCTGAATTCATCTACATATCTTATCTTTGCTCAGGCTTTTATCAGGGAAAATGATGTT
GCCTGCTTACTAAGCTTTGTCCGGGAGATTTCCGAGTTGATTTTTCCAAGTACTGCTACA
GTTATGAATAGGATCATCTTTTCCTTTGCCGAATGTGGACAGATTGATAAGGCCTTGCTG
ATCTTTGATCAAATGAAGAGTTTGAAATCTAAACCTGATGTGGTTACATATAACACCATT
TTGGGAATATTAGGCCGGTGTGGTAGAACAGATGAAATGCTTAAAGAGTTTGTGGCCATG
AAAGAGGATAGTCTAATTCCTGATATTGTTTCTTATAACACCGTAATTACTGGACTGCGG
AAGGTAGGCAGGCTTGAGTCATGCTTAGTATTTTTCAAGGAGATGTGTGAGAGAGGAATT
AAACCAGATTTGCGGACTTATAATGCTTTGATTGACAGCTTTGGAAAATGTGGTAATATT
GAGGAATCACTGAGATTTTTTAATGAGTTGAAGCTCAGGGGATTCCGCCCATCAATTCAT
GTTTACAGATCACTGATCAGTAATTTAAAGAAGATGGGGAAGTTGGAGTTGGCTGTTGCT
TTTTCAAATGAGATGAAGGAATCAGTCTCAAACCATCATGGACCAAACCATATTCAACGG
AAAAACAAATAG

Peptide Sequence

PEP ID

XP_016499982.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g11900-like [Nicotiana tabacum]
Sequence

MVAAAFNGRAKLTTLTFLCHSCFNRLNYSVAVGLHSSAKGIRAFNTLHRCRNFFLNNCIE
SIPVGVLFNWPSFIPSIFSGSFQSISTQASPAEFVDEVLTEVLSVMANSQSSGEELCAAY
IDKFCNDRNLSAATKLLQTLHDKNILLPPIAYNRFFKAAGEENDIGLLCQSFKDLLVSCK
SLNSSTYLIFAQAFIRENDVACLLSFVREISELIFPSTATVMNRIIFSFAECGQIDKALL
IFDQMKSLKSKPDVVTYNTILGILGRCGRTDEMLKEFVAMKEDSLIPDIVSYNTVITGLR
KVGRLESCLVFFKEMCERGIKPDLRTYNALIDSFGKCGNIEESLRFFNELKLRGFRPSIH
VYRSLISNLKKMGKLELAVAFSNEMKESVSNHHGPNHIQRKNK

Transcript Sequence

Gene sequence data has not been registered.